[Bigjob-users] Reg: An issue while running a test Bigjob

pradeep kumar Mantha pradeepm66 at gmail.com
Sun Nov 27 12:19:33 CST 2011


Yes.
In $HOME directory just create link with name .saga.ini
ln -s $HOME/saga_adaptors/saga.ini .saga.ini


On Sun, Nov 27, 2011 at 12:11 PM, Muralidhar Chouhan <cmural1 at tigers.lsu.edu
> wrote:

> I cant see it in my $HOME directory, there is no hidden file with name *.saga.ini
> (*i have used *ls -a* to see all the hidden files)
>
>
> On Sun, Nov 27, 2011 at 12:05 PM, pradeep kumar Mantha <
> pradeepm66 at gmail.com> wrote:
>
>>
>>
>> On Sun, Nov 27, 2011 at 11:45 AM, Muralidhar Chouhan <
>> cmural1 at tigers.lsu.edu> wrote:
>>
>>> I can see the file mentioned in the following path,
>>>
>>> $HOME/saga_adaptors/saga.ini
>>>
>>
>> I think you created the file in $HOME/saga_adaptors with filename saga.ini
>>
>> The file should be in $HOME directory and name of the file is ".saga.ini"
>> ( .saga.ini is a hidden file and starts with "." )
>>
>>
>>
>>> i have modified the file as mentioned, however i did not change the *location,
>>> *i am not sure if i can copy paste the one that you shared, please
>>> confirm. It did not work for me. please find the attachments of my*
>>>  saga.ini* file and the *source code*.
>>>
>>> (location in my file)
>>> location = ${SAGA_LOCATION:/N/soft/SAGA/saga/1.6/gcc-4.1.2}
>>>
>>> I have got below error this time,
>>>
>>> pilot_dir = saga.advert.directory(saga.url(pilot_url),
>>> saga.advert.Create | saga.advert.CreateParents | saga.advert.ReadWrite)
>>> saga.no_success: SAGA(NoSuccess): default_advert: Unable to establish
>>> connection to database_connection: dbname='advertdb' host='
>>> advert.cct.lsu.edu' password='<password>' port='8080' user='<username>'
>>> Cannot establish connection to the database: FATAL:  password
>>> authentication failed for user "<username>"
>>>
>>>
>> Please use examples under tutorial section with corresponding
>> COORDINATION_URL. see FAQ 12.
>>
>>
>>
>>>
>>> Thanks & Regards,
>>> Muralidhar Chouhan
>>>
>>>
>>> On Sun, Nov 27, 2011 at 10:08 AM, pradeep kumar Mantha <
>>> pradeepm66 at gmail.com> wrote:
>>>
>>>> Currently!
>>>>
>>>> test-bigjob doesn't work on alamo since SAGA CSA installation was not
>>>> built with default  sqlite3 database. So please use examples under tutorial
>>>> tab on bigjob page.
>>>>
>>>>
>>>>
>>>> Could you please try to use advert.cct.lsu.edu as hostname & 8080 as
>>>> port.
>>>>
>>>>
>>>> Note:
>>>>
>>>>  Make sure you have file $HOME/.saga.ini
>>>> with content
>>>>
>>>>
>>>> [saga]
>>>>   # saga install root,  points to what is set in the environment, as
>>>>   # SAGA_LOCATION, or use the configure time prefix as fallback.
>>>>   location = ${SAGA_LOCATION:/var/tmp/saga-1.4.1_python2.6.4}
>>>>
>>>>   # where to find adaptor ini files
>>>>   ini_path = ${HOME}/saga_adaptors/
>>>>
>>>>
>>>> Hope it works.
>>>>
>>>> thanks
>>>> pradeep
>>>>
>>>>
>>>> On Sun, Nov 27, 2011 at 12:11 AM, Muralidhar Chouhan <
>>>> cmural1 at tigers.lsu.edu> wrote:
>>>>
>>>>> Dear Pradeep,
>>>>>
>>>>> I have tried the fix mentioned in the website, even then it gives me
>>>>> same error. Please confirm if the *host *parameter in the below line
>>>>> needs to be unchanged? please find the attachment of my *saga_adaptor_default_advert.ini
>>>>> *file.
>>>>>
>>>>>
>>>>> dbconnect = dbname=advertdb;host=<your hostname here>;port=5432;user=SAGA;password=SAGA_client
>>>>>
>>>>>
>>>>> *Regards,*
>>>>> Muralidhar Chouhan
>>>>>
>>>>>
>>>>> On Sat, Nov 26, 2011 at 11:31 PM, Ole Weidner <oweidner at cct.lsu.edu>wrote:
>>>>>
>>>>>> Hi,
>>>>>>
>>>>>> I don't see how http://faust.cct.lsu.edu/trac/bigjob/wiki/ce would
>>>>>> help in this case. Frankly, I don't understand the "fix" at all. There's no
>>>>>> explanatio. Also, please note the subtile difference between Muralidhar's
>>>>>> problem:
>>>>>>
>>>>>> Unable to establish connection to database_connection:
>>>>>> dbname='advertdb' host='*localhost*' password='<password>' port='*
>>>>>> 5432*' user='<username>'
>>>>>>
>>>>>> and the one in the FAQ section:
>>>>>>
>>>>>> Unable to establish connection to database_connection:
>>>>>> dbname='advertdb' host='*advert.cct.lsu.edu*' password='<password>'
>>>>>> port='*8080*' user='<username>'
>>>>>>
>>>>>> IMHO the role of the advert service is not made very clear in the
>>>>>> BigJob documentation and could easily become a stumbling block for the
>>>>>> casual BigJob user without any SAGA experience. In general, I think that
>>>>>> this needs to be addressed one way (replacing advert with something else)
>>>>>> or the other (make it more transparent to the user) in order to make BigJob
>>>>>> more user-friendly. I think the '*legendary*' HECToR project made
>>>>>> the same suggestion a while ago ;-)
>>>>>>
>>>>>> Cheers,
>>>>>> Ole
>>>>>>
>>>>>>
>>>>>> On Nov 26, 2011, at 10:52 PM, pradeep kumar Mantha wrote:
>>>>>>
>>>>>> Hi!
>>>>>>
>>>>>> Please find the solution at  FAQ's & mailing list->common errors on
>>>>>> bigjob [ http://faust.cct.lsu.edu/trac/bigjob/] website.
>>>>>>
>>>>>> Please let me know if it doesn't work.
>>>>>>
>>>>>> thanks
>>>>>> pradeep
>>>>>>
>>>>>> On Sat, Nov 26, 2011 at 9:38 PM, Muralidhar Chouhan <
>>>>>> cmural1 at tigers.lsu.edu> wrote:
>>>>>>
>>>>>>> Dear bigjob-users,
>>>>>>>
>>>>>>> I have installed the Bigjob on Futuregrid (alamo), but i am facing
>>>>>>> issues while running any test jobs on the machine. I have tested the
>>>>>>> successful installation of SAGA and Bigjob by running the following two
>>>>>>> lines in the python shell.
>>>>>>>
>>>>>>> import saga
>>>>>>> import bigjob
>>>>>>>
>>>>>>> There is a *test-bigjob *mentioned in the installation guide, i
>>>>>>> tried to run the same. It shows following error.
>>>>>>>
>>>>>>> "pilot_dir = saga.advert.directory(saga.url(pilot_url),
>>>>>>> saga.advert.Create | saga.advert.CreateParents | saga.advert.ReadWrite)
>>>>>>> saga.no_success: SAGA(NoSuccess): default_advert: Unable to
>>>>>>> establish connection to database_connection: dbname='advertdb'
>>>>>>> host='localhost' password='<password>' port='5432' user='<username>' Cannot
>>>>>>> establish connection to the database: could not connect to server:
>>>>>>> Connection refused
>>>>>>>         Is the server running on host "localhost" and accepting
>>>>>>>         TCP/IP connections on port 5432?"
>>>>>>>
>>>>>>> Please find the attachment of the text file containing the entire
>>>>>>> error output.please help.
>>>>>>>
>>>>>>>
>>>>>>> *Sincerely,*
>>>>>>> Muralidhar Chouhan
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> Bigjob-users mailing list
>>>>>>> Bigjob-users at mail.cct.lsu.edu
>>>>>>> https://mail.cct.lsu.edu/mailman/listinfo/bigjob-users
>>>>>>>
>>>>>>>
>>>>>> _______________________________________________
>>>>>> Bigjob-users mailing list
>>>>>> Bigjob-users at mail.cct.lsu.edu
>>>>>> https://mail.cct.lsu.edu/mailman/listinfo/bigjob-users
>>>>>>
>>>>>>
>>>>>>
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>>>>>> Bigjob-users mailing list
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>>>>>>
>>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Bigjob-users mailing list
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>>>>>
>>>>
>>>
>>
>
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