[Bigjob-users] Reg: An issue while running a test Bigjob
Muralidhar Chouhan
cmural1 at tigers.lsu.edu
Sun Nov 27 12:53:05 CST 2011
thanks a lot for the support.
i tried to use other resources , it shows following error.
"saga.bad_parameter: SAGA(BadParameter): condor_job: Adaptor supports
'condor' and 'condorg' URL schemes, 'pbspro' is not supported."
On Sun, Nov 27, 2011 at 12:39 PM, pradeep kumar Mantha <pradeepm66 at gmail.com
> wrote:
> Yes everything looks fine and the job executed successfully.
> Try using different resource urls given in the example to execute jobs as
> per your requirement.
>
> Please let us know if something is not clear.
>
> On Sun, Nov 27, 2011 at 12:33 PM, Muralidhar Chouhan <
> cmural1 at tigers.lsu.edu> wrote:
>
>> I have run the job, find the screen shot of my output.please suggest if i
>> am still missing something.
>>
>>
>> On Sun, Nov 27, 2011 at 12:19 PM, pradeep kumar Mantha <
>> pradeepm66 at gmail.com> wrote:
>>
>>> Yes.
>>> In $HOME directory just create link with name .saga.ini
>>> ln -s $HOME/saga_adaptors/saga.ini .saga.ini
>>>
>>>
>>> On Sun, Nov 27, 2011 at 12:11 PM, Muralidhar Chouhan <
>>> cmural1 at tigers.lsu.edu> wrote:
>>>
>>>> I cant see it in my $HOME directory, there is no hidden file with name
>>>> *.saga.ini (*i have used *ls -a* to see all the hidden files)
>>>>
>>>>
>>>> On Sun, Nov 27, 2011 at 12:05 PM, pradeep kumar Mantha <
>>>> pradeepm66 at gmail.com> wrote:
>>>>
>>>>>
>>>>>
>>>>> On Sun, Nov 27, 2011 at 11:45 AM, Muralidhar Chouhan <
>>>>> cmural1 at tigers.lsu.edu> wrote:
>>>>>
>>>>>> I can see the file mentioned in the following path,
>>>>>>
>>>>>> $HOME/saga_adaptors/saga.ini
>>>>>>
>>>>>
>>>>> I think you created the file in $HOME/saga_adaptors with filename
>>>>> saga.ini
>>>>>
>>>>> The file should be in $HOME directory and name of the file is
>>>>> ".saga.ini" ( .saga.ini is a hidden file and starts with "." )
>>>>>
>>>>>
>>>>>
>>>>>> i have modified the file as mentioned, however i did not change the *location,
>>>>>> *i am not sure if i can copy paste the one that you shared, please
>>>>>> confirm. It did not work for me. please find the attachments of my*
>>>>>> saga.ini* file and the *source code*.
>>>>>>
>>>>>> (location in my file)
>>>>>> location = ${SAGA_LOCATION:/N/soft/SAGA/saga/1.6/gcc-4.1.2}
>>>>>>
>>>>>> I have got below error this time,
>>>>>>
>>>>>> pilot_dir = saga.advert.directory(saga.url(pilot_url),
>>>>>> saga.advert.Create | saga.advert.CreateParents | saga.advert.ReadWrite)
>>>>>> saga.no_success: SAGA(NoSuccess): default_advert: Unable to establish
>>>>>> connection to database_connection: dbname='advertdb' host='
>>>>>> advert.cct.lsu.edu' password='<password>' port='8080'
>>>>>> user='<username>' Cannot establish connection to the database: FATAL:
>>>>>> password authentication failed for user "<username>"
>>>>>>
>>>>>>
>>>>> Please use examples under tutorial section with corresponding
>>>>> COORDINATION_URL. see FAQ 12.
>>>>>
>>>>>
>>>>>
>>>>>>
>>>>>> Thanks & Regards,
>>>>>> Muralidhar Chouhan
>>>>>>
>>>>>>
>>>>>> On Sun, Nov 27, 2011 at 10:08 AM, pradeep kumar Mantha <
>>>>>> pradeepm66 at gmail.com> wrote:
>>>>>>
>>>>>>> Currently!
>>>>>>>
>>>>>>> test-bigjob doesn't work on alamo since SAGA CSA installation was
>>>>>>> not built with default sqlite3 database. So please use examples under
>>>>>>> tutorial tab on bigjob page.
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> Could you please try to use advert.cct.lsu.edu as hostname & 8080
>>>>>>> as port.
>>>>>>>
>>>>>>>
>>>>>>> Note:
>>>>>>>
>>>>>>> Make sure you have file $HOME/.saga.ini
>>>>>>> with content
>>>>>>>
>>>>>>> [saga]
>>>>>>> # saga install root, points to what is set in the environment, as
>>>>>>> # SAGA_LOCATION, or use the configure time prefix as fallback.
>>>>>>> location = ${SAGA_LOCATION:/var/tmp/saga-1.4.1_python2.6.4}
>>>>>>>
>>>>>>> # where to find adaptor ini files
>>>>>>> ini_path = ${HOME}/saga_adaptors/
>>>>>>>
>>>>>>>
>>>>>>> Hope it works.
>>>>>>>
>>>>>>> thanks
>>>>>>> pradeep
>>>>>>>
>>>>>>>
>>>>>>> On Sun, Nov 27, 2011 at 12:11 AM, Muralidhar Chouhan <
>>>>>>> cmural1 at tigers.lsu.edu> wrote:
>>>>>>>
>>>>>>>> Dear Pradeep,
>>>>>>>>
>>>>>>>> I have tried the fix mentioned in the website, even then it gives
>>>>>>>> me same error. Please confirm if the *host *parameter in the below
>>>>>>>> line needs to be unchanged? please find the attachment of my *saga_adaptor_default_advert.ini
>>>>>>>> *file.
>>>>>>>>
>>>>>>>> dbconnect = dbname=advertdb;host=<your hostname here>;port=5432;user=SAGA;password=SAGA_client
>>>>>>>>
>>>>>>>>
>>>>>>>> *Regards,*
>>>>>>>> Muralidhar Chouhan
>>>>>>>>
>>>>>>>>
>>>>>>>> On Sat, Nov 26, 2011 at 11:31 PM, Ole Weidner <oweidner at cct.lsu.edu
>>>>>>>> > wrote:
>>>>>>>>
>>>>>>>>> Hi,
>>>>>>>>>
>>>>>>>>> I don't see how http://faust.cct.lsu.edu/trac/bigjob/wiki/cewould help in this case. Frankly, I don't understand the "fix" at all.
>>>>>>>>> There's no explanatio. Also, please note the subtile difference between
>>>>>>>>> Muralidhar's problem:
>>>>>>>>>
>>>>>>>>> Unable to establish connection to database_connection:
>>>>>>>>> dbname='advertdb' host='*localhost*' password='<password>' port='*
>>>>>>>>> 5432*' user='<username>'
>>>>>>>>>
>>>>>>>>> and the one in the FAQ section:
>>>>>>>>>
>>>>>>>>> Unable to establish connection to database_connection:
>>>>>>>>> dbname='advertdb' host='*advert.cct.lsu.edu*'
>>>>>>>>> password='<password>' port='*8080*' user='<username>'
>>>>>>>>>
>>>>>>>>> IMHO the role of the advert service is not made very clear in the
>>>>>>>>> BigJob documentation and could easily become a stumbling block for the
>>>>>>>>> casual BigJob user without any SAGA experience. In general, I think that
>>>>>>>>> this needs to be addressed one way (replacing advert with something else)
>>>>>>>>> or the other (make it more transparent to the user) in order to make BigJob
>>>>>>>>> more user-friendly. I think the '*legendary*' HECToR project made
>>>>>>>>> the same suggestion a while ago ;-)
>>>>>>>>>
>>>>>>>>> Cheers,
>>>>>>>>> Ole
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> On Nov 26, 2011, at 10:52 PM, pradeep kumar Mantha wrote:
>>>>>>>>>
>>>>>>>>> Hi!
>>>>>>>>>
>>>>>>>>> Please find the solution at FAQ's & mailing list->common errors
>>>>>>>>> on bigjob [ http://faust.cct.lsu.edu/trac/bigjob/] website.
>>>>>>>>>
>>>>>>>>> Please let me know if it doesn't work.
>>>>>>>>>
>>>>>>>>> thanks
>>>>>>>>> pradeep
>>>>>>>>>
>>>>>>>>> On Sat, Nov 26, 2011 at 9:38 PM, Muralidhar Chouhan <
>>>>>>>>> cmural1 at tigers.lsu.edu> wrote:
>>>>>>>>>
>>>>>>>>>> Dear bigjob-users,
>>>>>>>>>>
>>>>>>>>>> I have installed the Bigjob on Futuregrid (alamo), but i am
>>>>>>>>>> facing issues while running any test jobs on the machine. I have tested the
>>>>>>>>>> successful installation of SAGA and Bigjob by running the following two
>>>>>>>>>> lines in the python shell.
>>>>>>>>>>
>>>>>>>>>> import saga
>>>>>>>>>> import bigjob
>>>>>>>>>>
>>>>>>>>>> There is a *test-bigjob *mentioned in the installation guide, i
>>>>>>>>>> tried to run the same. It shows following error.
>>>>>>>>>>
>>>>>>>>>> "pilot_dir = saga.advert.directory(saga.url(pilot_url),
>>>>>>>>>> saga.advert.Create | saga.advert.CreateParents | saga.advert.ReadWrite)
>>>>>>>>>> saga.no_success: SAGA(NoSuccess): default_advert: Unable to
>>>>>>>>>> establish connection to database_connection: dbname='advertdb'
>>>>>>>>>> host='localhost' password='<password>' port='5432' user='<username>' Cannot
>>>>>>>>>> establish connection to the database: could not connect to server:
>>>>>>>>>> Connection refused
>>>>>>>>>> Is the server running on host "localhost" and accepting
>>>>>>>>>> TCP/IP connections on port 5432?"
>>>>>>>>>>
>>>>>>>>>> Please find the attachment of the text file containing the entire
>>>>>>>>>> error output.please help.
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> *Sincerely,*
>>>>>>>>>> Muralidhar Chouhan
>>>>>>>>>>
>>>>>>>>>> _______________________________________________
>>>>>>>>>> Bigjob-users mailing list
>>>>>>>>>> Bigjob-users at mail.cct.lsu.edu
>>>>>>>>>> https://mail.cct.lsu.edu/mailman/listinfo/bigjob-users
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>> _______________________________________________
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>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
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>>>>>>>>>
>>>>>>>>>
>>>>>>>>
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>>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>
>>>
>>
>
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